Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.95■□□□□ 0.3
Usp53P15975 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.95■□□□□ 0.3
Usp53P15975 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Mir7023-201ENSMUST00000185093 64 ntBASIC16.95■□□□□ 0.3
Usp53P15975 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.95■□□□□ 0.3
Usp53P15975 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.95■□□□□ 0.3
Usp53P15975 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp53P15975 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp53P15975 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.94■□□□□ 0.3
Usp53P15975 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Usp53P15975 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp53P15975 Gm12151-201ENSMUST00000121374 290 ntBASIC16.94■□□□□ 0.3
Usp53P15975 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp53P15975 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp53P15975 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.94■□□□□ 0.3
Usp53P15975 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.94■□□□□ 0.3
Usp53P15975 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp53P15975 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp53P15975 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp53P15975 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Usp53P15975 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp53P15975 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp53P15975 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp53P15975 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp53P15975 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp53P15975 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.93■□□□□ 0.3
Usp53P15975 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp53P15975 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp53P15975 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Usp53P15975 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Usp53P15975 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.93■□□□□ 0.3
Usp53P15975 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Usp53P15975 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.93■□□□□ 0.3
Usp53P15975 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp53P15975 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp53P15975 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp53P15975 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp53P15975 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Usp53P15975 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp53P15975 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp53P15975 Gm29310-201ENSMUST00000185468 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21825-201ENSMUST00000185728 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm29109-201ENSMUST00000185895 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21896-201ENSMUST00000186520 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21873-201ENSMUST00000186728 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21794-201ENSMUST00000187056 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21880-201ENSMUST00000187275 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21826-201ENSMUST00000187451 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21198-201ENSMUST00000188393 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21749-201ENSMUST00000189343 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21901-201ENSMUST00000189568 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm29424-201ENSMUST00000189716 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm28599-201ENSMUST00000189838 694 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21867-201ENSMUST00000189917 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm29269-201ENSMUST00000190087 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21722-201ENSMUST00000190153 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm28423-201ENSMUST00000190701 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21899-201ENSMUST00000190745 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21910-201ENSMUST00000191163 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21849-201ENSMUST00000191571 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm28678-201ENSMUST00000191593 696 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms