Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl1P12850 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl1P12850 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl1P12850 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl1P12850 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl1P12850 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl1P12850 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl1P12850 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.16□□□□□ -0.46
Cxcl1P12850 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.16□□□□□ -0.46
Cxcl1P12850 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cxcl1P12850 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.15□□□□□ -0.46
Cxcl1P12850 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cxcl1P12850 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cxcl1P12850 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Cxcl1P12850 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.15□□□□□ -0.46
Cxcl1P12850 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.15□□□□□ -0.46
Cxcl1P12850 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cxcl1P12850 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Cxcl1P12850 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl1P12850 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.15□□□□□ -0.46
Cxcl1P12850 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.15□□□□□ -0.47
Cxcl1P12850 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cxcl1P12850 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cxcl1P12850 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Cxcl1P12850 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cxcl1P12850 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.14□□□□□ -0.47
Cxcl1P12850 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.14□□□□□ -0.47
Cxcl1P12850 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.14□□□□□ -0.47
Cxcl1P12850 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cxcl1P12850 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.14□□□□□ -0.47
Cxcl1P12850 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.14□□□□□ -0.47
Cxcl1P12850 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cxcl1P12850 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl1P12850 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Cxcl1P12850 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cxcl1P12850 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Cxcl1P12850 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cxcl1P12850 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cxcl1P12850 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.13□□□□□ -0.47
Cxcl1P12850 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cxcl1P12850 Gm8749-201ENSMUST00000117737 331 ntBASIC12.13□□□□□ -0.47
Cxcl1P12850 Gm13418-201ENSMUST00000119097 944 ntBASIC12.13□□□□□ -0.47
Cxcl1P12850 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.13□□□□□ -0.47
Cxcl1P12850 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.13□□□□□ -0.47
Cxcl1P12850 Gm5682-201ENSMUST00000173402 505 ntBASIC12.13□□□□□ -0.47
Cxcl1P12850 Gm9726-201ENSMUST00000180321 678 ntBASIC12.13□□□□□ -0.47
Cxcl1P12850 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.13□□□□□ -0.47
Cxcl1P12850 Gm6089-201ENSMUST00000197666 938 ntBASIC12.13□□□□□ -0.47
Cxcl1P12850 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms