Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc6P10629 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxc6P10629 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.18
Hoxc6P10629 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxc6P10629 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxc6P10629 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxc6P10629 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Hoxc6P10629 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Gm12585-201ENSMUST00000117307 290 ntBASIC16.2■□□□□ 0.18
Hoxc6P10629 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.2■□□□□ 0.18
Hoxc6P10629 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.2■□□□□ 0.18
Hoxc6P10629 Mir6392-201ENSMUST00000184924 108 ntBASIC16.2■□□□□ 0.18
Hoxc6P10629 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.2■□□□□ 0.18
Hoxc6P10629 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.2■□□□□ 0.18
Hoxc6P10629 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc6P10629 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Hoxc6P10629 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hoxc6P10629 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Hoxc6P10629 Gm15806-201ENSMUST00000120696 955 ntBASIC16.19■□□□□ 0.18
Hoxc6P10629 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.19■□□□□ 0.18
Hoxc6P10629 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxc6P10629 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.19■□□□□ 0.18
Hoxc6P10629 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.19■□□□□ 0.18
Hoxc6P10629 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.19■□□□□ 0.18
Hoxc6P10629 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Hoxc6P10629 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxc6P10629 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Hoxc6P10629 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc6P10629 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.18■□□□□ 0.18
Hoxc6P10629 Gm17150-201ENSMUST00000165577 381 ntBASIC16.18■□□□□ 0.18
Hoxc6P10629 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.18■□□□□ 0.18
Hoxc6P10629 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Hoxc6P10629 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.18■□□□□ 0.18
Hoxc6P10629 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc6P10629 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Hoxc6P10629 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.17■□□□□ 0.18
Hoxc6P10629 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.17■□□□□ 0.18
Hoxc6P10629 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms