Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
NefmP08553 AC025913.2-201ENSMUST00000220136 1766 ntBASIC21.68■■□□□ 1.06
NefmP08553 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
NefmP08553 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
NefmP08553 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NefmP08553 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NefmP08553 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NefmP08553 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NefmP08553 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NefmP08553 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
NefmP08553 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.66■■□□□ 1.06
NefmP08553 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC21.66■■□□□ 1.06
NefmP08553 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
NefmP08553 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NefmP08553 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
NefmP08553 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NefmP08553 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
NefmP08553 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NefmP08553 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.06
NefmP08553 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
NefmP08553 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NefmP08553 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
NefmP08553 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
NefmP08553 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.64■■□□□ 1.05
NefmP08553 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21.64■■□□□ 1.05
NefmP08553 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.64■■□□□ 1.05
NefmP08553 Gm45167-201ENSMUST00000208007 322 ntBASIC21.64■■□□□ 1.05
NefmP08553 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NefmP08553 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NefmP08553 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NefmP08553 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NefmP08553 Gm5366-201ENSMUST00000215494 1338 ntBASIC21.63■■□□□ 1.05
NefmP08553 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NefmP08553 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
NefmP08553 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NefmP08553 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms