Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
P04224 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.89□□□□□ -0.35
P04224 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.89□□□□□ -0.35
P04224 Gm17808-201ENSMUST00000200859 894 ntBASIC12.89□□□□□ -0.35
P04224 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.89□□□□□ -0.35
P04224 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
P04224 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
P04224 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.88□□□□□ -0.35
P04224 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
P04224 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.88□□□□□ -0.35
P04224 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
P04224 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
P04224 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
P04224 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.88□□□□□ -0.35
P04224 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.88□□□□□ -0.35
P04224 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.88□□□□□ -0.35
P04224 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.88□□□□□ -0.35
P04224 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.88□□□□□ -0.35
P04224 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.88□□□□□ -0.35
P04224 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.88□□□□□ -0.35
P04224 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.88□□□□□ -0.35
P04224 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.88□□□□□ -0.35
P04224 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.88□□□□□ -0.35
P04224 Gm8825-201ENSMUST00000182565 998 ntBASIC12.88□□□□□ -0.35
P04224 Gm4518-201ENSMUST00000182638 718 ntBASIC12.88□□□□□ -0.35
P04224 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.88□□□□□ -0.35
P04224 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.88□□□□□ -0.35
P04224 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.88□□□□□ -0.35
P04224 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.88□□□□□ -0.35
P04224 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.88□□□□□ -0.35
P04224 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.88□□□□□ -0.35
P04224 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
P04224 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
P04224 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
P04224 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
P04224 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P04224 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.88□□□□□ -0.35
P04224 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.87□□□□□ -0.35
P04224 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04224 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.87□□□□□ -0.35
P04224 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
P04224 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04224 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
P04224 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04224 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04224 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04224 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
P04224 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.87□□□□□ -0.35
P04224 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04224 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04224 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04224 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.87□□□□□ -0.35
P04224 Gm13312-201ENSMUST00000119631 718 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms