Protein–RNA interactions for Protein: P01727

Ig lambda-1 chain V region S43, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01727 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
P01727 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
P01727 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.72□□□□□ -0.53
P01727 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.72□□□□□ -0.53
P01727 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Gm27306-201ENSMUST00000183970 107 ntBASIC11.72□□□□□ -0.53
P01727 Gm17837-201ENSMUST00000186435 985 ntBASIC11.72□□□□□ -0.53
P01727 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.72□□□□□ -0.53
P01727 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.72□□□□□ -0.53
P01727 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P01727 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01727 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01727 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01727 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01727 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P01727 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.71□□□□□ -0.53
P01727 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P01727 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01727 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P01727 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
P01727 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
P01727 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01727 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.71□□□□□ -0.53
P01727 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01727 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01727 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01727 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.71□□□□□ -0.54
P01727 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
P01727 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
P01727 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01727 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
P01727 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01727 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.71□□□□□ -0.54
P01727 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P01727 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01727 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.71□□□□□ -0.54
P01727 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01727 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
P01727 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
P01727 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
P01727 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P01727 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.7□□□□□ -0.54
P01727 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P01727 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
P01727 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.7□□□□□ -0.54
P01727 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.7□□□□□ -0.54
P01727 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.7□□□□□ -0.54
P01727 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.7□□□□□ -0.54
P01727 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.7□□□□□ -0.54
P01727 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
P01727 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
P01727 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.7□□□□□ -0.54
P01727 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01727 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms