Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.41□□□□□ -0.74
Sh2d1aO88890 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.4□□□□□ -0.74
Sh2d1aO88890 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 AV026068-213ENSMUST00000223675 1171 ntBASIC10.4□□□□□ -0.74
Sh2d1aO88890 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sh2d1aO88890 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sh2d1aO88890 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Sh2d1aO88890 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Sh2d1aO88890 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sh2d1aO88890 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sh2d1aO88890 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Sh2d1aO88890 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sh2d1aO88890 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.4□□□□□ -0.75
Sh2d1aO88890 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Sh2d1aO88890 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sh2d1aO88890 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Gm4899-201ENSMUST00000178708 719 ntBASIC10.39□□□□□ -0.75
Sh2d1aO88890 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.39□□□□□ -0.75
Sh2d1aO88890 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Gm7461-201ENSMUST00000058918 827 ntBASIC10.39□□□□□ -0.75
Sh2d1aO88890 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms