Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm24752-201ENSMUST00000178240 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm24496-201ENSMUST00000178287 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm25649-201ENSMUST00000178476 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm25548-201ENSMUST00000178681 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm23147-201ENSMUST00000178841 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm26095-201ENSMUST00000179270 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm22171-201ENSMUST00000179283 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm23936-201ENSMUST00000179354 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm22619-201ENSMUST00000179516 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm25255-201ENSMUST00000179579 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm24755-201ENSMUST00000179691 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm26506-201ENSMUST00000179692 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm25086-201ENSMUST00000179931 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm23243-201ENSMUST00000180047 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm24659-201ENSMUST00000180212 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm24169-201ENSMUST00000180244 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm23689-201ENSMUST00000180354 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm27359-201ENSMUST00000184153 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm27785-201ENSMUST00000184268 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm27466-201ENSMUST00000184396 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gm27703-201ENSMUST00000184836 110 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Lmx1bO88609 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Lmx1bO88609 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Celf4-206ENSMUST00000224553 1729 ntBASIC13.3□□□□□ -0.28
Lmx1bO88609 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lmx1bO88609 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lmx1bO88609 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lmx1bO88609 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lmx1bO88609 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lmx1bO88609 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Lmx1bO88609 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.29□□□□□ -0.28
Lmx1bO88609 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Gm11543-201ENSMUST00000120758 370 ntBASIC13.29□□□□□ -0.28
Lmx1bO88609 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Lmx1bO88609 Gm10253-201ENSMUST00000194270 940 ntBASIC13.29□□□□□ -0.28
Lmx1bO88609 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.29□□□□□ -0.28
Lmx1bO88609 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.29□□□□□ -0.28
Lmx1bO88609 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.29□□□□□ -0.28
Lmx1bO88609 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Lmx1bO88609 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Lmx1bO88609 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lmx1bO88609 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Gm14057-201ENSMUST00000120631 482 ntBASIC13.28□□□□□ -0.28
Lmx1bO88609 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms