Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.85■□□□□ 0.45
Cops6O88545 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cops6O88545 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.85■□□□□ 0.45
Cops6O88545 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cops6O88545 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cops6O88545 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cops6O88545 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Cops6O88545 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Cops6O88545 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Cops6O88545 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 BC001981-202ENSMUST00000191393 1545 ntBASIC17.84■□□□□ 0.45
Cops6O88545 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.84■□□□□ 0.45
Cops6O88545 AA619741-201ENSMUST00000195095 646 ntBASIC17.84■□□□□ 0.45
Cops6O88545 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.84■□□□□ 0.45
Cops6O88545 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.84■□□□□ 0.45
Cops6O88545 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.84■□□□□ 0.45
Cops6O88545 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cops6O88545 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cops6O88545 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops6O88545 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cops6O88545 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cops6O88545 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cops6O88545 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cops6O88545 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cops6O88545 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cops6O88545 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cops6O88545 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.45
Cops6O88545 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Cops6O88545 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.83■□□□□ 0.44
Cops6O88545 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Gm10275-202ENSMUST00000168697 495 ntBASIC17.83■□□□□ 0.44
Cops6O88545 Gm9522-201ENSMUST00000182394 926 ntBASIC17.83■□□□□ 0.44
Cops6O88545 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.83■□□□□ 0.44
Cops6O88545 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.83■□□□□ 0.44
Cops6O88545 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.83■□□□□ 0.44
Cops6O88545 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.83■□□□□ 0.44
Cops6O88545 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.83■□□□□ 0.44
Cops6O88545 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cops6O88545 Gm10275-201ENSMUST00000092620 635 ntBASIC17.83■□□□□ 0.44
Cops6O88545 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops6O88545 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cops6O88545 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cops6O88545 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Gm22189-201ENSMUST00000103822 86 ntBASIC17.82■□□□□ 0.44
Cops6O88545 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Cops6O88545 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.82■□□□□ 0.44
Cops6O88545 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.82■□□□□ 0.44
Cops6O88545 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cops6O88545 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cops6O88545 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.82■□□□□ 0.44
Cops6O88545 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cops6O88545 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cops6O88545 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.82■□□□□ 0.44
Cops6O88545 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops6O88545 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.81■□□□□ 0.44
Cops6O88545 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms