Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
Ttc3O88196 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ttc3O88196 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ttc3O88196 Gm12859-201ENSMUST00000117834 427 ntBASIC15.27■□□□□ 0.04
Ttc3O88196 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.27■□□□□ 0.04
Ttc3O88196 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.27■□□□□ 0.04
Ttc3O88196 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.27■□□□□ 0.04
Ttc3O88196 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ttc3O88196 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Ttc3O88196 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ttc3O88196 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.27■□□□□ 0.04
Ttc3O88196 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ttc3O88196 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ttc3O88196 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ttc3O88196 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.27■□□□□ 0.03
Ttc3O88196 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ttc3O88196 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.27■□□□□ 0.03
Ttc3O88196 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ttc3O88196 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ttc3O88196 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ttc3O88196 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ttc3O88196 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.26■□□□□ 0.03
Ttc3O88196 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.26■□□□□ 0.03
Ttc3O88196 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.26■□□□□ 0.03
Ttc3O88196 Gm6916-202ENSMUST00000205523 195 ntBASIC15.26■□□□□ 0.03
Ttc3O88196 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.26■□□□□ 0.03
Ttc3O88196 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.26■□□□□ 0.03
Ttc3O88196 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ttc3O88196 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.26■□□□□ 0.03
Ttc3O88196 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.26■□□□□ 0.03
Ttc3O88196 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Ttc3O88196 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ttc3O88196 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ttc3O88196 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ttc3O88196 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.25■□□□□ 0.03
Ttc3O88196 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ttc3O88196 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.25■□□□□ 0.03
Ttc3O88196 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.25■□□□□ 0.03
Ttc3O88196 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ttc3O88196 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Ttc3O88196 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.25■□□□□ 0.03
Ttc3O88196 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ttc3O88196 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Ttc3O88196 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.24■□□□□ 0.03
Ttc3O88196 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.24■□□□□ 0.03
Ttc3O88196 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.24■□□□□ 0.03
Ttc3O88196 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.24■□□□□ 0.03
Ttc3O88196 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Ttc3O88196 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Gm9794-201ENSMUST00000202370 423 ntBASIC15.24■□□□□ 0.03
Ttc3O88196 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.24■□□□□ 0.03
Ttc3O88196 Gm46209-201ENSMUST00000217912 553 ntBASIC15.24■□□□□ 0.03
Ttc3O88196 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.24■□□□□ 0.03
Ttc3O88196 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.24■□□□□ 0.03
Ttc3O88196 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms