Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Pknox1O70477 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.59□□□□□ -0.07
Pknox1O70477 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.59□□□□□ -0.07
Pknox1O70477 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.59□□□□□ -0.07
Pknox1O70477 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.59□□□□□ -0.07
Pknox1O70477 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.59□□□□□ -0.07
Pknox1O70477 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pknox1O70477 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.58□□□□□ -0.07
Pknox1O70477 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pknox1O70477 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
Pknox1O70477 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pknox1O70477 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pknox1O70477 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.58□□□□□ -0.08
Pknox1O70477 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.58□□□□□ -0.08
Pknox1O70477 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pknox1O70477 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.58□□□□□ -0.08
Pknox1O70477 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.58□□□□□ -0.08
Pknox1O70477 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.58□□□□□ -0.08
Pknox1O70477 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.58□□□□□ -0.08
Pknox1O70477 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.58□□□□□ -0.08
Pknox1O70477 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pknox1O70477 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pknox1O70477 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pknox1O70477 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Pknox1O70477 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pknox1O70477 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pknox1O70477 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Pknox1O70477 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pknox1O70477 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pknox1O70477 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pknox1O70477 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Gm13036-201ENSMUST00000117799 748 ntBASIC14.57□□□□□ -0.08
Pknox1O70477 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.57□□□□□ -0.08
Pknox1O70477 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.57□□□□□ -0.08
Pknox1O70477 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.57□□□□□ -0.08
Pknox1O70477 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pknox1O70477 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pknox1O70477 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pknox1O70477 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pknox1O70477 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.56□□□□□ -0.08
Pknox1O70477 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pknox1O70477 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pknox1O70477 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pknox1O70477 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pknox1O70477 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.56□□□□□ -0.08
Pknox1O70477 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.56□□□□□ -0.08
Pknox1O70477 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.56□□□□□ -0.08
Pknox1O70477 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.56□□□□□ -0.08
Pknox1O70477 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pknox1O70477 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pknox1O70477 Gm10819-201ENSMUST00000099988 561 ntBASIC14.56□□□□□ -0.08
Pknox1O70477 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms