Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.12□□□□□ -0.15
Cacna1bO55017 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Gm27701-201ENSMUST00000184498 110 ntBASIC14.12□□□□□ -0.15
Cacna1bO55017 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.12□□□□□ -0.15
Cacna1bO55017 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.12□□□□□ -0.15
Cacna1bO55017 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cacna1bO55017 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cacna1bO55017 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cacna1bO55017 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.12□□□□□ -0.15
Cacna1bO55017 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cacna1bO55017 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.11□□□□□ -0.15
Cacna1bO55017 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Cacna1bO55017 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cacna1bO55017 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.11□□□□□ -0.15
Cacna1bO55017 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.11□□□□□ -0.15
Cacna1bO55017 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cacna1bO55017 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cacna1bO55017 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1bO55017 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Gm37917-201ENSMUST00000194711 392 ntBASIC14.1□□□□□ -0.15
Cacna1bO55017 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.1□□□□□ -0.15
Cacna1bO55017 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Gm15806-201ENSMUST00000120696 955 ntBASIC14.1□□□□□ -0.15
Cacna1bO55017 Mir1982-201ENSMUST00000157368 74 ntBASIC14.1□□□□□ -0.15
Cacna1bO55017 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Gm45331-201ENSMUST00000209868 554 ntBASIC14.1□□□□□ -0.15
Cacna1bO55017 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.1□□□□□ -0.15
Cacna1bO55017 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1bO55017 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cacna1bO55017 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Gm13226-201ENSMUST00000117838 404 ntBASIC14.09□□□□□ -0.15
Cacna1bO55017 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.09□□□□□ -0.15
Cacna1bO55017 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms