Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.31□□□□□ -0.28
Rnf13O54965 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rnf13O54965 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.31□□□□□ -0.28
Rnf13O54965 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.31□□□□□ -0.28
Rnf13O54965 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.31□□□□□ -0.28
Rnf13O54965 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rnf13O54965 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.31□□□□□ -0.28
Rnf13O54965 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.31□□□□□ -0.28
Rnf13O54965 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Rnf13O54965 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.31□□□□□ -0.28
Rnf13O54965 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.3□□□□□ -0.28
Rnf13O54965 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rnf13O54965 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.3□□□□□ -0.28
Rnf13O54965 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rnf13O54965 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Rnf13O54965 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rnf13O54965 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.3□□□□□ -0.28
Rnf13O54965 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Rnf13O54965 Gm18489-201ENSMUST00000172565 551 ntBASIC13.3□□□□□ -0.28
Rnf13O54965 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rnf13O54965 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Gm18669-201ENSMUST00000216049 778 ntBASIC13.3□□□□□ -0.28
Rnf13O54965 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.3□□□□□ -0.28
Rnf13O54965 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Rnf13O54965 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rnf13O54965 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rnf13O54965 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf13O54965 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.3□□□□□ -0.28
Rnf13O54965 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf13O54965 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.29□□□□□ -0.28
Rnf13O54965 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.29□□□□□ -0.28
Rnf13O54965 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.29□□□□□ -0.28
Rnf13O54965 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Rnf13O54965 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rnf13O54965 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Gm4535-201ENSMUST00000182274 558 ntBASIC13.29□□□□□ -0.28
Rnf13O54965 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.29□□□□□ -0.28
Rnf13O54965 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.29□□□□□ -0.28
Rnf13O54965 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Rnf13O54965 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.29□□□□□ -0.28
Rnf13O54965 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Gm10355-201ENSMUST00000097146 517 ntBASIC13.29□□□□□ -0.28
Rnf13O54965 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rnf13O54965 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rnf13O54965 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf13O54965 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms