Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.62□□□□□ -0.39
DffbO54788 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
DffbO54788 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Gm13418-201ENSMUST00000119097 944 ntBASIC12.62□□□□□ -0.39
DffbO54788 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
DffbO54788 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
DffbO54788 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.62□□□□□ -0.39
DffbO54788 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
DffbO54788 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
DffbO54788 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
DffbO54788 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
DffbO54788 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.61□□□□□ -0.39
DffbO54788 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
DffbO54788 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.61□□□□□ -0.39
DffbO54788 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DffbO54788 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
DffbO54788 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DffbO54788 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
DffbO54788 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.61□□□□□ -0.39
DffbO54788 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.61□□□□□ -0.39
DffbO54788 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.61□□□□□ -0.39
DffbO54788 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.61□□□□□ -0.39
DffbO54788 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
DffbO54788 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
DffbO54788 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
DffbO54788 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DffbO54788 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.6□□□□□ -0.39
DffbO54788 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
DffbO54788 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
DffbO54788 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
DffbO54788 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.6□□□□□ -0.39
DffbO54788 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
DffbO54788 Gm5682-201ENSMUST00000173402 505 ntBASIC12.6□□□□□ -0.39
DffbO54788 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.6□□□□□ -0.39
DffbO54788 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.6□□□□□ -0.39
DffbO54788 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.6□□□□□ -0.39
DffbO54788 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.6□□□□□ -0.39
DffbO54788 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
DffbO54788 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms