Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Gm6623-201ENSMUST00000173570 544 ntBASIC12.3□□□□□ -0.44
Ccr6O54689 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Gm44454-201ENSMUST00000198541 138 ntBASIC12.3□□□□□ -0.44
Ccr6O54689 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccr6O54689 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccr6O54689 Gm18041-201ENSMUST00000218210 618 ntBASIC12.3□□□□□ -0.44
Ccr6O54689 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ccr6O54689 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccr6O54689 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccr6O54689 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ccr6O54689 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccr6O54689 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccr6O54689 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccr6O54689 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccr6O54689 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccr6O54689 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ccr6O54689 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccr6O54689 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccr6O54689 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccr6O54689 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ccr6O54689 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccr6O54689 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.29□□□□□ -0.44
Ccr6O54689 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccr6O54689 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccr6O54689 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ccr6O54689 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccr6O54689 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccr6O54689 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccr6O54689 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccr6O54689 Rprl3-201ENSMUST00000157400 290 ntBASIC12.28□□□□□ -0.44
Ccr6O54689 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccr6O54689 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccr6O54689 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccr6O54689 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Ccr6O54689 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccr6O54689 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms