Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ndufa1O35683 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ndufa1O35683 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ndufa1O35683 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ndufa1O35683 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ndufa1O35683 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Ndufa1O35683 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ndufa1O35683 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ndufa1O35683 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ndufa1O35683 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.55□□□□□ -0.72
Ndufa1O35683 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ndufa1O35683 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.55□□□□□ -0.72
Ndufa1O35683 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.55□□□□□ -0.72
Ndufa1O35683 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ndufa1O35683 Gm6659-201ENSMUST00000174752 547 ntBASIC10.55□□□□□ -0.72
Ndufa1O35683 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Ndufa1O35683 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.55□□□□□ -0.72
Ndufa1O35683 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ndufa1O35683 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ndufa1O35683 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Ndufa1O35683 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ndufa1O35683 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ndufa1O35683 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Ndufa1O35683 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.54□□□□□ -0.72
Ndufa1O35683 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
Ndufa1O35683 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.54□□□□□ -0.72
Ndufa1O35683 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.54□□□□□ -0.72
Ndufa1O35683 Gm13312-201ENSMUST00000119631 718 ntBASIC10.54□□□□□ -0.72
Ndufa1O35683 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.54□□□□□ -0.72
Ndufa1O35683 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.54□□□□□ -0.72
Ndufa1O35683 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.54□□□□□ -0.72
Ndufa1O35683 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ndufa1O35683 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ndufa1O35683 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ndufa1O35683 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ndufa1O35683 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.53□□□□□ -0.72
Ndufa1O35683 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.53□□□□□ -0.72
Ndufa1O35683 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ndufa1O35683 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ndufa1O35683 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ndufa1O35683 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ndufa1O35683 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ndufa1O35683 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ndufa1O35683 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ndufa1O35683 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms