Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.47□□□□□ -0.09
Slc1a6O35544 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc1a6O35544 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc1a6O35544 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc1a6O35544 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc1a6O35544 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.47□□□□□ -0.09
Slc1a6O35544 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc1a6O35544 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc1a6O35544 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.47□□□□□ -0.09
Slc1a6O35544 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Slc1a6O35544 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc1a6O35544 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc1a6O35544 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc1a6O35544 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Slc1a6O35544 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Slc1a6O35544 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.46□□□□□ -0.09
Slc1a6O35544 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Slc1a6O35544 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.46□□□□□ -0.09
Slc1a6O35544 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.46□□□□□ -0.09
Slc1a6O35544 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.46□□□□□ -0.09
Slc1a6O35544 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc1a6O35544 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc1a6O35544 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc1a6O35544 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc1a6O35544 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.46□□□□□ -0.1
Slc1a6O35544 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc1a6O35544 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Slc1a6O35544 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc1a6O35544 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc1a6O35544 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Slc1a6O35544 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc1a6O35544 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Slc1a6O35544 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Slc1a6O35544 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.45□□□□□ -0.1
Slc1a6O35544 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Slc1a6O35544 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Gm8749-201ENSMUST00000117737 331 ntBASIC14.45□□□□□ -0.1
Slc1a6O35544 Gm13836-201ENSMUST00000121159 501 ntBASIC14.45□□□□□ -0.1
Slc1a6O35544 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.45□□□□□ -0.1
Slc1a6O35544 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.45□□□□□ -0.1
Slc1a6O35544 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.45□□□□□ -0.1
Slc1a6O35544 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.45□□□□□ -0.1
Slc1a6O35544 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc1a6O35544 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Slc1a6O35544 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Slc1a6O35544 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Slc1a6O35544 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.44□□□□□ -0.1
Slc1a6O35544 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Slc1a6O35544 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.44□□□□□ -0.1
Slc1a6O35544 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.44□□□□□ -0.1
Slc1a6O35544 Gm7284-201ENSMUST00000131667 944 ntBASIC14.44□□□□□ -0.1
Slc1a6O35544 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Slc1a6O35544 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Slc1a6O35544 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Slc1a6O35544 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Slc1a6O35544 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.44□□□□□ -0.1
Slc1a6O35544 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.44□□□□□ -0.1
Slc1a6O35544 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc1a6O35544 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms