Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk4O35493 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk4O35493 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk4O35493 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clk4O35493 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clk4O35493 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk4O35493 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.12□□□□□ -0.15
Clk4O35493 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clk4O35493 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk4O35493 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clk4O35493 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk4O35493 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk4O35493 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk4O35493 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Clk4O35493 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Clk4O35493 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.11□□□□□ -0.15
Clk4O35493 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clk4O35493 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Clk4O35493 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.11□□□□□ -0.15
Clk4O35493 Gm17271-201ENSMUST00000165535 355 ntBASIC14.11□□□□□ -0.15
Clk4O35493 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clk4O35493 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clk4O35493 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Clk4O35493 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk4O35493 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clk4O35493 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.1□□□□□ -0.15
Clk4O35493 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Clk4O35493 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.1□□□□□ -0.15
Clk4O35493 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.1□□□□□ -0.15
Clk4O35493 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.1□□□□□ -0.15
Clk4O35493 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.1□□□□□ -0.15
Clk4O35493 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.1□□□□□ -0.15
Clk4O35493 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.1□□□□□ -0.15
Clk4O35493 Gm10175-201ENSMUST00000086013 645 ntBASIC14.1□□□□□ -0.15
Clk4O35493 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.1□□□□□ -0.15
Clk4O35493 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Clk4O35493 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk4O35493 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clk4O35493 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clk4O35493 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.09□□□□□ -0.15
Clk4O35493 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clk4O35493 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.09□□□□□ -0.15
Clk4O35493 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clk4O35493 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clk4O35493 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clk4O35493 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.09□□□□□ -0.15
Clk4O35493 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.09□□□□□ -0.15
Clk4O35493 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.09□□□□□ -0.15
Clk4O35493 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clk4O35493 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Clk4O35493 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clk4O35493 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk4O35493 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clk4O35493 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clk4O35493 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clk4O35493 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Clk4O35493 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.08□□□□□ -0.16
Clk4O35493 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms