Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Atf6bO35451 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Atf6bO35451 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Atf6bO35451 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.75□□□□□ -0.37
Atf6bO35451 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Atf6bO35451 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Atf6bO35451 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.75□□□□□ -0.37
Atf6bO35451 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.75□□□□□ -0.37
Atf6bO35451 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Atf6bO35451 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.75□□□□□ -0.37
Atf6bO35451 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.75□□□□□ -0.37
Atf6bO35451 Gm2213-201ENSMUST00000197485 688 ntBASIC12.75□□□□□ -0.37
Atf6bO35451 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Gm45747-201ENSMUST00000212203 999 ntBASIC12.75□□□□□ -0.37
Atf6bO35451 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Atf6bO35451 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Atf6bO35451 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.75□□□□□ -0.37
Atf6bO35451 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.75□□□□□ -0.37
Atf6bO35451 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Atf6bO35451 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Atf6bO35451 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6bO35451 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.74□□□□□ -0.37
Atf6bO35451 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atf6bO35451 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Atf6bO35451 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Celf4-206ENSMUST00000224553 1729 ntBASIC12.74□□□□□ -0.37
Atf6bO35451 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.74□□□□□ -0.37
Atf6bO35451 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.74□□□□□ -0.37
Atf6bO35451 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.74□□□□□ -0.37
Atf6bO35451 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Gm4995-201ENSMUST00000117247 432 ntBASIC12.74□□□□□ -0.37
Atf6bO35451 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Gm17271-201ENSMUST00000165535 355 ntBASIC12.74□□□□□ -0.37
Atf6bO35451 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.74□□□□□ -0.37
Atf6bO35451 Gm44492-201ENSMUST00000197012 141 ntBASIC12.74□□□□□ -0.37
Atf6bO35451 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.74□□□□□ -0.37
Atf6bO35451 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.74□□□□□ -0.37
Atf6bO35451 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.74□□□□□ -0.37
Atf6bO35451 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Atf6bO35451 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Atf6bO35451 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6bO35451 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.73□□□□□ -0.37
Atf6bO35451 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Atf6bO35451 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms