Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cpsf2O35218 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cpsf2O35218 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cpsf2O35218 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.71■□□□□ 0.11
Cpsf2O35218 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cpsf2O35218 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.71■□□□□ 0.11
Cpsf2O35218 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Cpsf2O35218 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf2O35218 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
Cpsf2O35218 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cpsf2O35218 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Cpsf2O35218 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cpsf2O35218 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cpsf2O35218 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Gm7153-201ENSMUST00000117092 455 ntBASIC15.7■□□□□ 0.1
Cpsf2O35218 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Gm17971-201ENSMUST00000190239 806 ntBASIC15.7■□□□□ 0.1
Cpsf2O35218 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Cpsf2O35218 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.7■□□□□ 0.1
Cpsf2O35218 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cpsf2O35218 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf2O35218 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.69■□□□□ 0.1
Cpsf2O35218 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Gm12008-201ENSMUST00000117791 755 ntBASIC15.69■□□□□ 0.1
Cpsf2O35218 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.69■□□□□ 0.1
Cpsf2O35218 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cpsf2O35218 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf2O35218 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpsf2O35218 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf2O35218 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cpsf2O35218 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf2O35218 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.68■□□□□ 0.1
Cpsf2O35218 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf2O35218 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf2O35218 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf2O35218 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.68■□□□□ 0.1
Cpsf2O35218 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf2O35218 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf2O35218 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cpsf2O35218 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpsf2O35218 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf2O35218 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf2O35218 Gm11764-201ENSMUST00000120221 623 ntBASIC15.68■□□□□ 0.1
Cpsf2O35218 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf2O35218 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms