Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
Ebf3O08791 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Ebf3O08791 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Ebf3O08791 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Gm27437-201ENSMUST00000183429 107 ntBASIC15.24■□□□□ 0.03
Ebf3O08791 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.24■□□□□ 0.03
Ebf3O08791 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Ebf3O08791 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ebf3O08791 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf3O08791 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ebf3O08791 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.23■□□□□ 0.03
Ebf3O08791 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.23■□□□□ 0.03
Ebf3O08791 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.23■□□□□ 0.03
Ebf3O08791 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ebf3O08791 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.23■□□□□ 0.03
Ebf3O08791 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.23■□□□□ 0.03
Ebf3O08791 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Gm27989-201ENSMUST00000184721 107 ntBASIC15.23■□□□□ 0.03
Ebf3O08791 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ebf3O08791 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.23■□□□□ 0.03
Ebf3O08791 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.23■□□□□ 0.03
Ebf3O08791 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf3O08791 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.23■□□□□ 0.03
Ebf3O08791 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Ebf3O08791 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.22■□□□□ 0.03
Ebf3O08791 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.22■□□□□ 0.03
Ebf3O08791 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ebf3O08791 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.22■□□□□ 0.03
Ebf3O08791 Gm27920-201ENSMUST00000183953 96 ntBASIC15.22■□□□□ 0.03
Ebf3O08791 Gm27306-201ENSMUST00000183970 107 ntBASIC15.22■□□□□ 0.03
Ebf3O08791 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.22■□□□□ 0.03
Ebf3O08791 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.22■□□□□ 0.03
Ebf3O08791 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Ebf3O08791 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ebf3O08791 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ebf3O08791 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ebf3O08791 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf3O08791 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Ebf3O08791 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ebf3O08791 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms