Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ccdc180J3QNE4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Ccdc180J3QNE4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Gm11960-202ENSMUST00000181063 2858 ntBASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc180J3QNE4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Gm26464-201ENSMUST00000157094 305 ntBASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 AC110817.1-201ENSMUST00000225706 605 ntBASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 AC125117.1-201ENSMUST00000228121 468 ntBASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC26.35■■□□□ 1.81
Ccdc180J3QNE4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Gm4804-201ENSMUST00000182234 999 ntBASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Gm6007-201ENSMUST00000208170 823 ntBASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 AC166349.1-201ENSMUST00000220866 695 ntBASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc180J3QNE4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Gm11524-201ENSMUST00000119349 807 ntBASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC26.33■■□□□ 1.81
Ccdc180J3QNE4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ccdc180J3QNE4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Ccdc180J3QNE4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Gm13226-201ENSMUST00000117838 404 ntBASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc180J3QNE4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Gm12390-201ENSMUST00000117897 397 ntBASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Mir1938-201ENSMUST00000158746 100 ntBASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Gm17795-201ENSMUST00000214505 757 ntBASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms