Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Gm6415-201ENSMUST00000118488 348 ntBASIC14.61□□□□□ -0.07
Gm3139J3QK78 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.61□□□□□ -0.07
Gm3139J3QK78 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3139J3QK78 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.6□□□□□ -0.07
Gm3139J3QK78 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Gm37230-201ENSMUST00000194491 818 ntBASIC14.6□□□□□ -0.07
Gm3139J3QK78 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3139J3QK78 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Gm29541-201ENSMUST00000191351 678 ntBASIC14.59□□□□□ -0.07
Gm3139J3QK78 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Gm3139J3QK78 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.59□□□□□ -0.07
Gm3139J3QK78 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Gm3139J3QK78 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm3139J3QK78 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm3139J3QK78 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Gm3139J3QK78 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Gm3139J3QK78 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms