Protein–RNA interactions for Protein: F6V5V4

Gm11397, Predicted gene 11397, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11397F6V5V4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm11397F6V5V4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Gm11397F6V5V4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm11397F6V5V4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gm11397F6V5V4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm11397F6V5V4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.66□□□□□ -0.22
Gm11397F6V5V4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gm11397F6V5V4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm11397F6V5V4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm11397F6V5V4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Gm11397F6V5V4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Gm11397F6V5V4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Gm11397F6V5V4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Gm11397F6V5V4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Gm11397F6V5V4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Efs-202ENSMUST00000227037 2540 ntBASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm11397F6V5V4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm11397F6V5V4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms