Protein–RNA interactions for Protein: E9Q368

Tarbp1, TAR RNA-binding protein 1, mousemouse

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tarbp1E9Q368 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC20.32■□□□□ 0.84
Tarbp1E9Q368 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tarbp1E9Q368 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tarbp1E9Q368 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC20.32■□□□□ 0.84
Tarbp1E9Q368 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tarbp1E9Q368 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tarbp1E9Q368 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tarbp1E9Q368 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC20.32■□□□□ 0.84
Tarbp1E9Q368 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tarbp1E9Q368 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Gm14451-201ENSMUST00000121581 1542 ntBASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Gm4081-201ENSMUST00000195287 1838 ntBASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tarbp1E9Q368 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 AY702102-202ENSMUST00000194651 1173 ntBASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Gm17795-201ENSMUST00000214505 757 ntBASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC20.29■□□□□ 0.84
Tarbp1E9Q368 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Gm38037-201ENSMUST00000192600 1624 ntBASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Gm5303-201ENSMUST00000117943 1252 ntBASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Gm37714-201ENSMUST00000194742 342 ntBASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tarbp1E9Q368 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tarbp1E9Q368 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC20.27■□□□□ 0.84
Tarbp1E9Q368 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms