Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cntnap3E9PY62 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cntnap3E9PY62 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cntnap3E9PY62 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cntnap3E9PY62 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Gm18054-201ENSMUST00000207539 555 ntBASIC16.07■□□□□ 0.16
Cntnap3E9PY62 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Gm6091-201ENSMUST00000098307 165 ntBASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cntnap3E9PY62 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Gm15808-201ENSMUST00000119046 604 ntBASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Gm8652-201ENSMUST00000181363 964 ntBASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Mir7070-201ENSMUST00000183657 86 ntBASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Mir8109-201ENSMUST00000184375 117 ntBASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cntnap3E9PY62 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Gm27847-201ENSMUST00000183711 107 ntBASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Gm27375-201ENSMUST00000183799 107 ntBASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Gm45453-201ENSMUST00000211758 853 ntBASIC16.05■□□□□ 0.16
Cntnap3E9PY62 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cntnap3E9PY62 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cntnap3E9PY62 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms