Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Gm9824-201ENSMUST00000178707 561 ntBASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdh17E9PXF0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Gm27321-201ENSMUST00000185021 205 ntBASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Gm43767-201ENSMUST00000198933 381 ntBASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh17E9PXF0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Celf4-206ENSMUST00000224553 1729 ntBASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Gm27920-201ENSMUST00000183953 96 ntBASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms