Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col6a3E9PWQ3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm37230-201ENSMUST00000194491 818 ntBASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm5425-201ENSMUST00000214125 459 ntBASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm2451-201ENSMUST00000199447 999 ntBASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm10290-201ENSMUST00000200451 999 ntBASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a3E9PWQ3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Gm26464-201ENSMUST00000157094 305 ntBASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms