Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 Gm13689-201ENSMUST00000119360 685 ntBASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 Gm5276-201ENSMUST00000196683 1047 ntBASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hfm1D3Z4R1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Gm13612-201ENSMUST00000119276 390 ntBASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Olfr582-201ENSMUST00000098212 960 ntBASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hfm1D3Z4R1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Gm6983-201ENSMUST00000214912 628 ntBASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hfm1D3Z4R1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Gm18222-201ENSMUST00000202416 1387 ntBASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.24■□□□□ 0.83
Hfm1D3Z4R1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Gm27572-201ENSMUST00000183702 255 ntBASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Gm18054-201ENSMUST00000207539 555 ntBASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Gm7172-201ENSMUST00000218047 1152 ntBASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Gm21038-201ENSMUST00000222205 1383 ntBASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hfm1D3Z4R1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms