Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip3B9EHT4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip3B9EHT4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip3B9EHT4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip3B9EHT4 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.24□□□□□ -0.13
Clip3B9EHT4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip3B9EHT4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip3B9EHT4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip3B9EHT4 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.24□□□□□ -0.13
Clip3B9EHT4 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.24□□□□□ -0.13
Clip3B9EHT4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Chchd1-203ENSMUST00000224633 557 ntBASIC14.23□□□□□ -0.13
Clip3B9EHT4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Clip3B9EHT4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip3B9EHT4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Gm11025-201ENSMUST00000140773 466 ntBASIC14.22□□□□□ -0.13
Clip3B9EHT4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.22□□□□□ -0.13
Clip3B9EHT4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.22□□□□□ -0.13
Clip3B9EHT4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.22□□□□□ -0.13
Clip3B9EHT4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip3B9EHT4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Mir1895-201ENSMUST00000122615 79 ntBASIC14.21□□□□□ -0.13
Clip3B9EHT4 Gm27494-201ENSMUST00000184735 189 ntBASIC14.21□□□□□ -0.13
Clip3B9EHT4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms