Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Gm12485-201ENSMUST00000119641 291 ntBASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Snora78-201ENSMUST00000158630 128 ntBASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn7aB1AYL1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Gm27892-201ENSMUST00000185017 106 ntBASIC18.58■□□□□ 0.57
Scn7aB1AYL1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.58■□□□□ 0.57
Scn7aB1AYL1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn7aB1AYL1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn7aB1AYL1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn7aB1AYL1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn7aB1AYL1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn7aB1AYL1 Efs-202ENSMUST00000227037 2540 ntBASIC18.58■□□□□ 0.56
Scn7aB1AYL1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn7aB1AYL1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn7aB1AYL1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn7aB1AYL1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Gm11803-201ENSMUST00000119966 444 ntBASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Gm27772-201ENSMUST00000184900 187 ntBASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.57■□□□□ 0.56
Scn7aB1AYL1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Gm15429-201ENSMUST00000151268 798 ntBASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Gm6007-201ENSMUST00000208170 823 ntBASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn7aB1AYL1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms