Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Gm10013-201ENSMUST00000106074 672 ntBASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Rprl3-201ENSMUST00000157400 290 ntBASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Gm6345-202ENSMUST00000180900 204 ntBASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Gm12887B1AVM1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Gm15794-201ENSMUST00000120182 631 ntBASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Gm11950-201ENSMUST00000121615 838 ntBASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Gm45328-201ENSMUST00000210942 917 ntBASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm12887B1AVM1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms