Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm11814-201ENSMUST00000119515 929 ntBASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm17420-201ENSMUST00000164753 153 ntBASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.84□□□□□ -0.03
Col4a6B1AVK5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a6B1AVK5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a6B1AVK5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a6B1AVK5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a6B1AVK5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a6B1AVK5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a6B1AVK5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Col4a6B1AVK5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Col4a6B1AVK5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Gm11803-201ENSMUST00000119966 444 ntBASIC14.83□□□□□ -0.04
Col4a6B1AVK5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Gm6983-201ENSMUST00000214912 628 ntBASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Mir497b-201ENSMUST00000093601 125 ntBASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a6B1AVK5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Mir1247-201ENSMUST00000116706 82 ntBASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Gm13385-201ENSMUST00000121089 220 ntBASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Gm45841-201ENSMUST00000207700 164 ntBASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a6B1AVK5 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Gm27486-201ENSMUST00000184923 80 ntBASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Gm7561-201ENSMUST00000211203 886 ntBASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Gm10012-201ENSMUST00000078252 192 ntBASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Gm9257-201ENSMUST00000221254 232 ntBASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a6B1AVK5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms