Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Gm13786-201ENSMUST00000122371 333 ntBASIC10.95□□□□□ -0.66
Col6a5A6H584 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col6a5A6H584 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.95□□□□□ -0.66
Col6a5A6H584 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Gm13297-201ENSMUST00000120205 934 ntBASIC10.95□□□□□ -0.66
Col6a5A6H584 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col6a5A6H584 Gm6082-201ENSMUST00000215204 454 ntBASIC10.94□□□□□ -0.66
Col6a5A6H584 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col6a5A6H584 Gm6598-201ENSMUST00000202719 2615 ntBASIC10.94□□□□□ -0.66
Col6a5A6H584 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a5A6H584 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Gm16177-201ENSMUST00000120728 718 ntBASIC10.94□□□□□ -0.66
Col6a5A6H584 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.94□□□□□ -0.66
Col6a5A6H584 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.94□□□□□ -0.66
Col6a5A6H584 Gm29705-201ENSMUST00000212598 474 ntBASIC10.94□□□□□ -0.66
Col6a5A6H584 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.94□□□□□ -0.66
Col6a5A6H584 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.94□□□□□ -0.66
Col6a5A6H584 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col6a5A6H584 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a5A6H584 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC10.94□□□□□ -0.66
Col6a5A6H584 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a5A6H584 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col6a5A6H584 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Gm29396-201ENSMUST00000185659 716 ntBASIC10.93□□□□□ -0.66
Col6a5A6H584 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.93□□□□□ -0.66
Col6a5A6H584 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.93□□□□□ -0.66
Col6a5A6H584 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.93□□□□□ -0.66
Col6a5A6H584 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col6a5A6H584 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.93□□□□□ -0.66
Col6a5A6H584 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col6a5A6H584 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.93□□□□□ -0.66
Col6a5A6H584 Gm2451-201ENSMUST00000199447 999 ntBASIC10.93□□□□□ -0.66
Col6a5A6H584 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.93□□□□□ -0.66
Col6a5A6H584 Gm10290-201ENSMUST00000200451 999 ntBASIC10.93□□□□□ -0.66
Col6a5A6H584 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms