Protein–RNA interactions for Protein: A2AT37

Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), mousemouse

Known RBP Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf2A2AT37 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upf2A2AT37 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upf2A2AT37 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upf2A2AT37 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upf2A2AT37 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upf2A2AT37 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.22■□□□□ 0.67
Upf2A2AT37 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC19.22■□□□□ 0.67
Upf2A2AT37 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.22■□□□□ 0.67
Upf2A2AT37 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Upf2A2AT37 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Upf2A2AT37 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upf2A2AT37 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Upf2A2AT37 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Upf2A2AT37 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Upf2A2AT37 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.21■□□□□ 0.67
Upf2A2AT37 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC19.21■□□□□ 0.67
Upf2A2AT37 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Upf2A2AT37 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upf2A2AT37 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.2■□□□□ 0.66
Upf2A2AT37 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Upf2A2AT37 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Upf2A2AT37 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Upf2A2AT37 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Birc2-201ENSMUST00000054878 378 ntBASIC19.2■□□□□ 0.66
Upf2A2AT37 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.2■□□□□ 0.66
Upf2A2AT37 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Upf2A2AT37 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upf2A2AT37 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.19■□□□□ 0.66
Upf2A2AT37 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC19.19■□□□□ 0.66
Upf2A2AT37 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC19.19■□□□□ 0.66
Upf2A2AT37 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.19■□□□□ 0.66
Upf2A2AT37 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 AC121805.2-201ENSMUST00000218808 2538 ntBASIC19.19■□□□□ 0.66
Upf2A2AT37 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Upf2A2AT37 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Upf2A2AT37 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upf2A2AT37 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms