Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Gm9726-201ENSMUST00000180321 678 ntBASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc112A0AUP1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc112A0AUP1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc112A0AUP1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc112A0AUP1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc112A0AUP1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc112A0AUP1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Gm10060-201ENSMUST00000212002 111 ntBASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc112A0AUP1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Gm13036-201ENSMUST00000117799 748 ntBASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Gm13464-201ENSMUST00000119418 935 ntBASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Gm11452-201ENSMUST00000122376 690 ntBASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc112A0AUP1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc112A0AUP1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms