Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Gm28729A0A1B0GSW2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28729A0A1B0GSW2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28729A0A1B0GSW2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28729A0A1B0GSW2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gm28729A0A1B0GSW2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28729A0A1B0GSW2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm22189-201ENSMUST00000103822 86 ntBASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm6912-201ENSMUST00000117218 544 ntBASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm12490-201ENSMUST00000120255 560 ntBASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28729A0A1B0GSW2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm9229-201ENSMUST00000222777 126 ntBASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28729A0A1B0GSW2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28729A0A1B0GSW2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms