Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igkv8-27A0A0G2JF28 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igkv8-27A0A0G2JF28 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igkv8-27A0A0G2JF28 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Odf3b-204ENSMUST00000227834 930 ntBASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igkv8-27A0A0G2JF28 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Mir1199-201ENSMUST00000117015 119 ntBASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Gm7286-201ENSMUST00000182691 1007 ntBASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 AC122351.1-201ENSMUST00000220467 126 ntBASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Mxra8os-201ENSMUST00000097740 687 ntBASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Igkv8-27A0A0G2JF28 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms