Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm10499-201ENSMUST00000174094 934 ntBASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm37055-201ENSMUST00000191866 133 ntBASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm45328-201ENSMUST00000210942 917 ntBASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv3A0A0A6YYE2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm12497-201ENSMUST00000138778 237 ntBASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trbv3A0A0A6YYE2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms