Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm8825-201ENSMUST00000182565 998 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm4518-201ENSMUST00000182638 718 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav6n-6A0A075B6B2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm24589-201ENSMUST00000116692 94 ntBASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms