Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Gm8318-201ENSMUST00000182954 872 ntBASIC11.36□□□□□ -0.59
Trav16A0A075B653 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Mir3081-201ENSMUST00000175305 84 ntBASIC11.35□□□□□ -0.59
Trav16A0A075B653 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.35□□□□□ -0.59
Trav16A0A075B653 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16A0A075B653 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Acot6-202ENSMUST00000222921 3622 ntBASIC11.34□□□□□ -0.59
Trav16A0A075B653 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.34□□□□□ -0.59
Trav16A0A075B653 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.34□□□□□ -0.59
Trav16A0A075B653 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Gm17808-201ENSMUST00000200859 894 ntBASIC11.34□□□□□ -0.59
Trav16A0A075B653 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.34□□□□□ -0.59
Trav16A0A075B653 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms