Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gm27704-201ENSMUST00000185094 107 ntBASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm12644-201ENSMUST00000119935 606 ntBASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm19863-201ENSMUST00000192480 2218 ntBASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm12895-201ENSMUST00000122214 226 ntBASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms