Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Gm12260-201ENSMUST00000122447 411 ntBASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv4A0A075B5I2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Rpph1-201ENSMUST00000175096 319 ntBASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv4A0A075B5I2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Gm15427-201ENSMUST00000117288 531 ntBASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Gm15483-201ENSMUST00000120338 456 ntBASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Gm18206-201ENSMUST00000207027 926 ntBASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Gm9182-201ENSMUST00000217829 639 ntBASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms