Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
PdfS4R2K0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
PdfS4R2K0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PdfS4R2K0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Gm27741-201ENSMUST00000185060 237 ntBASIC11.3□□□□□ -0.6
PdfS4R2K0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.3□□□□□ -0.6
PdfS4R2K0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
PdfS4R2K0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
PdfS4R2K0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PdfS4R2K0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.3□□□□□ -0.6
PdfS4R2K0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
PdfS4R2K0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.3□□□□□ -0.6
PdfS4R2K0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdfS4R2K0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
PdfS4R2K0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
PdfS4R2K0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
PdfS4R2K0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Olfr129-201ENSMUST00000122318 993 ntBASIC11.29□□□□□ -0.6
PdfS4R2K0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.29□□□□□ -0.6
PdfS4R2K0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.29□□□□□ -0.6
PdfS4R2K0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.29□□□□□ -0.6
PdfS4R2K0 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.29□□□□□ -0.6
PdfS4R2K0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
PdfS4R2K0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
PdfS4R2K0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdfS4R2K0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.28□□□□□ -0.6
PdfS4R2K0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.28□□□□□ -0.6
PdfS4R2K0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
PdfS4R2K0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.28□□□□□ -0.6
PdfS4R2K0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
PdfS4R2K0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms