Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm45747-201ENSMUST00000212203 999 ntBASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.69□□□□□ -0.06
H2afb2S4R1M3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.69□□□□□ -0.06
H2afb2S4R1M3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb2S4R1M3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Gm9385-201ENSMUST00000117563 472 ntBASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Gm18206-201ENSMUST00000207027 926 ntBASIC14.68□□□□□ -0.06
H2afb2S4R1M3 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb2S4R1M3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Gm12260-201ENSMUST00000122447 411 ntBASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms