Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Gm9063-201ENSMUST00000223299 582 ntBASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Mir6977-201ENSMUST00000184960 64 ntBASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Gm38294-201ENSMUST00000192831 381 ntBASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smarcb1Q9Z0H3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcb1Q9Z0H3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcb1Q9Z0H3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcb1Q9Z0H3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcb1Q9Z0H3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Gm27321-201ENSMUST00000185021 205 ntBASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Gm16476-201ENSMUST00000221544 139 ntBASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcb1Q9Z0H3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Gm27631-201ENSMUST00000184163 466 ntBASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 AA619741-201ENSMUST00000195095 646 ntBASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Gm45453-201ENSMUST00000211758 853 ntBASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcb1Q9Z0H3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms