Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Gm24589-201ENSMUST00000116692 94 ntBASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Gm4535-201ENSMUST00000182274 558 ntBASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Gm17971-201ENSMUST00000190239 806 ntBASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Gm10355-201ENSMUST00000097146 517 ntBASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Gm27646-201ENSMUST00000183989 110 ntBASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd2Q9R1A8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Gm13418-201ENSMUST00000119097 944 ntBASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Gm6296-201ENSMUST00000222599 943 ntBASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms