Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Gm19540-201ENSMUST00000221843 810 ntBASIC12.99□□□□□ -0.33
Nubp1Q9R060 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.99□□□□□ -0.33
Nubp1Q9R060 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.98□□□□□ -0.33
Nubp1Q9R060 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.98□□□□□ -0.33
Nubp1Q9R060 Syt7-204ENSMUST00000223586 1344 ntBASIC12.98□□□□□ -0.33
Nubp1Q9R060 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Gm27680-201ENSMUST00000184192 160 ntBASIC12.98□□□□□ -0.33
Nubp1Q9R060 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.98□□□□□ -0.33
Nubp1Q9R060 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.98□□□□□ -0.33
Nubp1Q9R060 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.98□□□□□ -0.33
Nubp1Q9R060 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp1Q9R060 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.97□□□□□ -0.33
Nubp1Q9R060 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Gm14722-201ENSMUST00000118943 689 ntBASIC12.97□□□□□ -0.33
Nubp1Q9R060 Gm5970-201ENSMUST00000131638 1216 ntBASIC12.97□□□□□ -0.33
Nubp1Q9R060 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.97□□□□□ -0.33
Nubp1Q9R060 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Gm16215-201ENSMUST00000161990 637 ntBASIC12.97□□□□□ -0.33
Nubp1Q9R060 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nubp1Q9R060 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.97□□□□□ -0.33
Nubp1Q9R060 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Gm44286-201ENSMUST00000204098 1487 ntBASIC12.97□□□□□ -0.33
Nubp1Q9R060 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp1Q9R060 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.96□□□□□ -0.33
Nubp1Q9R060 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms