Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Gm20553-201ENSMUST00000204205 844 ntBASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Gm10154-201ENSMUST00000084445 354 ntBASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Gm11745-201ENSMUST00000121669 448 ntBASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Gm25925-201ENSMUST00000158314 306 ntBASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcf1Q9QZM3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clcf1Q9QZM3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Clcf1Q9QZM3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.33□□□□□ -0.27
Clcf1Q9QZM3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Clcf1Q9QZM3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clcf1Q9QZM3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clcf1Q9QZM3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Clcf1Q9QZM3 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms