Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.46□□□□□ -0.41
Six6Q9QZ28 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.46□□□□□ -0.41
Six6Q9QZ28 Gm21814-202ENSMUST00000203277 873 ntBASIC12.46□□□□□ -0.41
Six6Q9QZ28 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.46□□□□□ -0.41
Six6Q9QZ28 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six6Q9QZ28 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.46□□□□□ -0.41
Six6Q9QZ28 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six6Q9QZ28 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six6Q9QZ28 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six6Q9QZ28 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six6Q9QZ28 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six6Q9QZ28 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Six6Q9QZ28 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.45□□□□□ -0.42
Six6Q9QZ28 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Six6Q9QZ28 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six6Q9QZ28 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Six6Q9QZ28 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Gm15039-201ENSMUST00000118914 875 ntBASIC12.44□□□□□ -0.42
Six6Q9QZ28 Gm37722-201ENSMUST00000193757 208 ntBASIC12.44□□□□□ -0.42
Six6Q9QZ28 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Six6Q9QZ28 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms